Function reference • tabula

Diversity Measures

heterogeneity() evenness() index_berger() index_boone() index_brillouin() index_mcintosh() index_shannon() index_simpson(): Heterogeneity and Evenness

occurrence(): Co-Occurrence

rarefaction() index_baxter() index_hurlbert(): Rarefaction

richness() composition() index_ace() index_ice() index_chao1() index_chao2() index_margalef() index_menhinick(): Richness

similarity() index_jaccard() index_sorenson() index_bray() index_morisita() index_brainerd() index_binomial(): Similarity

simulate(<DiversityIndex>): Measure Diversity by Comparing to Simulated Assemblages

turnover() index_whittaker() index_cody() index_routledge1() index_routledge2() index_routledge3() index_wilson(): Turnover

Visualization

matrigraph() pvi(): Matrigraph

plot_bertin(): Bertin Diagram

plot_diceleraas(): Dice-Leraas Diagram

plot(<DiversityIndex>,<missing>): Diversity Plot

plot_ford(): Ford Diagram

plot_heatmap(): Heatmap

plot_rank(): Rank Plot

plot(<RarefactionIndex>,<missing>): Rarefaction Plot

plot_spot(): Spot Plot

seriograph() eppm(): Seriograph

Statistics

bootstrap(<DiversityIndex>): Bootstrap Estimation

jackknife(<DiversityIndex>): Jackknife Estimation

resample(): Resample

test_diversity(): Diversity Test

Getters and Setters

get_method() labels(<DiversityIndex>) labels(<RarefactionIndex>): Get or Set Parts of an Object

Datasets

aves: Birds Species and Abundances

cantabria: Early Magdalenian Engraved Bones

pueblo: Pueblo IV Period Ceramics

woodland: Trees Incidences